Phosphorylation-dependent signaling is maintained by opposing functions of kinase and phosphatases. In metabolic diseases, this phosphorylation-dephosphorylation balance is often dysregulated, wherein protein tyrosine phosphatases (PTPs) have been linked to obesity1, and is a major risk factor for associated liver dysfunction2. In particular, Protein Tyrosine Phosphatase Receptor Kappa (PTPRK) is involved in metabolic reprogramming and progression of metabolic dysfunction-associated steatotic liver disease (MASLD)3. To further elucidate its role, we profiled the Ptprk-/- mice responses to normal chow diet and high-fat, high-fructose, and high-cholesterol (HFHFHC) diet, using quantitative phosphoproteomics as a readout. To our surprise, although PTPRK is primarily expressed in the liver, we observed little changes on liver tyrosine phosphorylations. This challenges the phosphatase function of PTPRK, to instead suggest a broadly regulatory role of PTPRK as a metabolic switch, as PTPRK knockout mice remained lean despite being on a HFHFHC diet. Deeper analyses supporting the lean phenotype revealed significantly downregulated phosphosites associated with lipid biosynthesis, alongside the suppression of TOR and TORC1 signaling pathways – both of which are usually overactivated in MASLD. This further unfolds the critical regulatory role of PTPRK beyond dephosphorylation, and its prospect as a therapeutic target for liver diseases such as MASLD and metabolic dysfunction-associated steatohepatits (MASH).